STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF408Zinc finger protein 408. (441 aa)    
Predicted Functional Partners:
GPATCH3
G-patch domain containing 3.
   
    0.968
SAMD11
Sterile alpha motif domain containing 11.
    
 
 0.638
TSPAN12
Tetraspanin.
      
 0.557
ABHD12
Abhydrolase domain containing 12.
      
 0.537
ndp
CTCK domain-containing protein.
    
 
 0.517
RNF25
Ring finger protein 25.
   
    0.491
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.452
GRAMD4
GRAM domain containing 4.
    
 0.435
FZD4
Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.431
BTBD9
BTB domain containing 9.
      
 0.429
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.