Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCL6 | NEB | ENSACAP00000006553 | ENSACAP00000003825 | BCL6 transcription repressor. | Nebulin. | 0.749 |
DMD | LOC100565850 | ENSACAP00000007103 | ENSACAP00000001108 | Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. | Uncharacterized protein. | 0.547 |
DMD | MYL1 | ENSACAP00000007103 | ENSACAP00000010473 | Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. | Myosin light chain 1. | 0.429 |
DMD | NEB | ENSACAP00000007103 | ENSACAP00000003825 | Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. | Nebulin. | 0.661 |
DMD | TMOD2 | ENSACAP00000007103 | ENSACAP00000001518 | Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. | Tropomodulin 2. | 0.547 |
DMD | TMOD3 | ENSACAP00000007103 | ENSACAP00000023415 | Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. | Tropomodulin 3. | 0.547 |
DMD | TNNI2 | ENSACAP00000007103 | ENSACAP00000009373 | Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. | Troponin I2, fast skeletal type. | 0.439 |
DMD | tmod1 | ENSACAP00000007103 | ENSACAP00000004511 | Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. | Uncharacterized protein. | 0.547 |
LMOD2 | MYL1 | ENSACAP00000000859 | ENSACAP00000010473 | Leiomodin 2. | Myosin light chain 1. | 0.514 |
LMOD2 | NEB | ENSACAP00000000859 | ENSACAP00000003825 | Leiomodin 2. | Nebulin. | 0.782 |
LMOD2 | TNNI2 | ENSACAP00000000859 | ENSACAP00000009373 | Leiomodin 2. | Troponin I2, fast skeletal type. | 0.423 |
LOC100565850 | DMD | ENSACAP00000001108 | ENSACAP00000007103 | Uncharacterized protein. | Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. | 0.547 |
LOC100565850 | MYL1 | ENSACAP00000001108 | ENSACAP00000010473 | Uncharacterized protein. | Myosin light chain 1. | 0.607 |
LOC100565850 | NEB | ENSACAP00000001108 | ENSACAP00000003825 | Uncharacterized protein. | Nebulin. | 0.749 |
LOC100565850 | TNNI2 | ENSACAP00000001108 | ENSACAP00000009373 | Uncharacterized protein. | Troponin I2, fast skeletal type. | 0.519 |
MYL1 | DMD | ENSACAP00000010473 | ENSACAP00000007103 | Myosin light chain 1. | Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. | 0.429 |
MYL1 | LMOD2 | ENSACAP00000010473 | ENSACAP00000000859 | Myosin light chain 1. | Leiomodin 2. | 0.514 |
MYL1 | LOC100565850 | ENSACAP00000010473 | ENSACAP00000001108 | Myosin light chain 1. | Uncharacterized protein. | 0.607 |
MYL1 | MYOT | ENSACAP00000010473 | ENSACAP00000016826 | Myosin light chain 1. | Myotilin. | 0.408 |
MYL1 | NEB | ENSACAP00000010473 | ENSACAP00000003825 | Myosin light chain 1. | Nebulin. | 0.961 |
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