STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC60Coiled-coil domain containing 60. (552 aa)    
Predicted Functional Partners:
Ubxn11
Uncharacterized protein.
      
 0.541
TEX9
Testis expressed 9.
      
 0.499
FRMD8
FERM domain containing 8.
      
 0.470
rabl2a
Uncharacterized protein.
      
 0.461
GLOD4
Glyoxalase domain containing 4.
      
 0.455
SYTL1
Synaptotagmin like 1.
      
 0.455
FAM178B
Family with sequence similarity 178 member B.
      
 0.405
HSF2
Heat shock transcription factor 2.
      
 0.404
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
      
 0.404
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
      
 0.402
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.