STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP21Ubiquitin specific peptidase 21; Belongs to the peptidase C19 family. (595 aa)    
Predicted Functional Partners:
RNF41
Ring finger protein 41.
    
 0.779
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
   
 0.737
H9GK63_ANOCA
Uncharacterized protein.
   
 0.731
ubc
Uncharacterized protein.
   
 0.731
rps27a
Ubiquitin-like domain-containing protein.
    
 0.720
STAM
Signal transducing adaptor molecule.
    
 0.686
STAM2
Signal transducing adaptor molecule 2.
    
 0.686
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.663
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.649
GATA3
GATA binding protein 3.
    
 0.621
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.