STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACAG00000004292Uncharacterized protein (87 aa)    
Predicted Functional Partners:
VBP1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins
   
 
 0.956
PFDN1
Prefoldin subunit 1
   
 
 0.946
PFDN4
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins
   
 
 0.915
RPAP1
RNA polymerase II associated protein 1
      
 0.700
UXT
Ubiquitously-expressed, prefoldin-like chaperone
   
 
 0.676
PDRG1
P53 and DNA-damage regulated 1
   
 
 0.624
URI1
URI1, prefoldin-like chaperone
   
 
 0.623
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair
   
 
 0.567
PDCD5
Uncharacterized protein; Programmed cell death 5
   
   0.561
RPAP3
RNA polymerase II associated protein 3
   
 
 0.480
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Anolis carolinensis, Carolina anole, green anole
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