STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxl12F-box domain-containing protein. (324 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.854
cul1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.720
LOC100562987
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.720
RBX1
Ring-box 1.
    
 0.709
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.611
FBXL5
F-box and leucine rich repeat protein 5.
     
 0.557
SRP72
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
      
 0.553
Fbxo24
F-box domain-containing protein.
     
 0.538
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
      
 0.476
RNF7
Ring finger protein 7.
    
 0.470
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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