UXT protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UXT

Ubiquitously expressed prefoldin like chaperone. (157 aa)

Predicted Functional Partners:

URI1

0.924

WDR92

0.915

RPAP3

0.895

PIH1D1

0.848

PDRG1

0.840

H9GVV6_ANOCA

0.816

pfdn6

0.744

LOC103281778

0.744

RUVBL1

0.732

RUVBL2

0.714

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H9GVV6_ANOCA	LOC103281778	ENSACAP00000021567	ENSACAP00000004171	Uncharacterized protein.	Uncharacterized protein.	0.633
H9GVV6_ANOCA	PDRG1	ENSACAP00000021567	ENSACAP00000022878	Uncharacterized protein.	P53 and DNA damage regulated 1.	0.674
H9GVV6_ANOCA	PIH1D1	ENSACAP00000021567	ENSACAP00000017059	Uncharacterized protein.	PIH1 domain containing 1.	0.778
H9GVV6_ANOCA	RPAP3	ENSACAP00000021567	ENSACAP00000001618	Uncharacterized protein.	RNA polymerase II associated protein 3.	0.848
H9GVV6_ANOCA	RUVBL1	ENSACAP00000021567	ENSACAP00000007077	Uncharacterized protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.792
H9GVV6_ANOCA	RUVBL2	ENSACAP00000021567	ENSACAP00000012476	Uncharacterized protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.756
H9GVV6_ANOCA	URI1	ENSACAP00000021567	ENSACAP00000011993	Uncharacterized protein.	URI1 prefoldin like chaperone.	0.901
H9GVV6_ANOCA	UXT	ENSACAP00000021567	ENSACAP00000004639	Uncharacterized protein.	Ubiquitously expressed prefoldin like chaperone.	0.816
H9GVV6_ANOCA	WDR92	ENSACAP00000021567	ENSACAP00000001097	Uncharacterized protein.	WD repeat domain 92.	0.627
H9GVV6_ANOCA	pfdn6	ENSACAP00000021567	ENSACAP00000003447	Uncharacterized protein.	Uncharacterized protein.	0.633
LOC103281778	H9GVV6_ANOCA	ENSACAP00000004171	ENSACAP00000021567	Uncharacterized protein.	Uncharacterized protein.	0.633
LOC103281778	PDRG1	ENSACAP00000004171	ENSACAP00000022878	Uncharacterized protein.	P53 and DNA damage regulated 1.	0.587
LOC103281778	PIH1D1	ENSACAP00000004171	ENSACAP00000017059	Uncharacterized protein.	PIH1 domain containing 1.	0.536
LOC103281778	RPAP3	ENSACAP00000004171	ENSACAP00000001618	Uncharacterized protein.	RNA polymerase II associated protein 3.	0.710
LOC103281778	RUVBL1	ENSACAP00000004171	ENSACAP00000007077	Uncharacterized protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.583
LOC103281778	RUVBL2	ENSACAP00000004171	ENSACAP00000012476	Uncharacterized protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.531
LOC103281778	URI1	ENSACAP00000004171	ENSACAP00000011993	Uncharacterized protein.	URI1 prefoldin like chaperone.	0.706
LOC103281778	UXT	ENSACAP00000004171	ENSACAP00000004639	Uncharacterized protein.	Ubiquitously expressed prefoldin like chaperone.	0.744
LOC103281778	WDR92	ENSACAP00000004171	ENSACAP00000001097	Uncharacterized protein.	WD repeat domain 92.	0.528
LOC103281778	pfdn6	ENSACAP00000004171	ENSACAP00000003447	Uncharacterized protein.	Uncharacterized protein.	0.544