Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABT1 | DQX1 | ENSACAP00000006487 | ENSACAP00000004680 | Activator of basal transcription 1. | DEAQ-box RNA dependent ATPase 1. | 0.893 |
DQX1 | ABT1 | ENSACAP00000004680 | ENSACAP00000006487 | DEAQ-box RNA dependent ATPase 1. | Activator of basal transcription 1. | 0.893 |
DQX1 | EFTUD2 | ENSACAP00000004680 | ENSACAP00000007670 | DEAQ-box RNA dependent ATPase 1. | Elongation factor Tu GTP binding domain containing 2. | 0.920 |
DQX1 | NAT10 | ENSACAP00000004680 | ENSACAP00000013354 | DEAQ-box RNA dependent ATPase 1. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.896 |
DQX1 | SNRPD2 | ENSACAP00000004680 | ENSACAP00000016502 | DEAQ-box RNA dependent ATPase 1. | Small nuclear ribonucleoprotein Sm D2. | 0.917 |
DQX1 | SNRPD3 | ENSACAP00000004680 | ENSACAP00000003218 | DEAQ-box RNA dependent ATPase 1. | Small nuclear ribonucleoprotein D3 polypeptide. | 0.919 |
DQX1 | SNRPE | ENSACAP00000004680 | ENSACAP00000009865 | DEAQ-box RNA dependent ATPase 1. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.908 |
DQX1 | SNRPF | ENSACAP00000004680 | ENSACAP00000013798 | DEAQ-box RNA dependent ATPase 1. | Small nuclear ribonucleoprotein polypeptide F. | 0.927 |
DQX1 | SNRPG | ENSACAP00000004680 | ENSACAP00000007711 | DEAQ-box RNA dependent ATPase 1. | Small nuclear ribonucleoprotein G. | 0.890 |
DQX1 | UTP3 | ENSACAP00000004680 | ENSACAP00000012606 | DEAQ-box RNA dependent ATPase 1. | UTP3 small subunit processome component. | 0.948 |
DQX1 | XAB2 | ENSACAP00000004680 | ENSACAP00000016924 | DEAQ-box RNA dependent ATPase 1. | XPA binding protein 2. | 0.896 |
EFTUD2 | DQX1 | ENSACAP00000007670 | ENSACAP00000004680 | Elongation factor Tu GTP binding domain containing 2. | DEAQ-box RNA dependent ATPase 1. | 0.920 |
EFTUD2 | SNRPD2 | ENSACAP00000007670 | ENSACAP00000016502 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
EFTUD2 | SNRPD3 | ENSACAP00000007670 | ENSACAP00000003218 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein D3 polypeptide. | 0.999 |
EFTUD2 | SNRPE | ENSACAP00000007670 | ENSACAP00000009865 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
EFTUD2 | SNRPF | ENSACAP00000007670 | ENSACAP00000013798 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein polypeptide F. | 0.999 |
EFTUD2 | SNRPG | ENSACAP00000007670 | ENSACAP00000007711 | Elongation factor Tu GTP binding domain containing 2. | Small nuclear ribonucleoprotein G. | 0.998 |
EFTUD2 | XAB2 | ENSACAP00000007670 | ENSACAP00000016924 | Elongation factor Tu GTP binding domain containing 2. | XPA binding protein 2. | 0.998 |
NAT10 | DQX1 | ENSACAP00000013354 | ENSACAP00000004680 | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | DEAQ-box RNA dependent ATPase 1. | 0.896 |
NAT10 | SNRPD3 | ENSACAP00000013354 | ENSACAP00000003218 | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | Small nuclear ribonucleoprotein D3 polypeptide. | 0.412 |
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