Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103282118 | USP11 | ENSACAP00000019877 | ENSACAP00000004936 | Peptidase_M16 domain-containing protein. | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | 0.517 |
OTUD5 | USP11 | ENSACAP00000007458 | ENSACAP00000004936 | OTU deubiquitinase 5. | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | 0.545 |
OTUD5 | nfkbia | ENSACAP00000007458 | ENSACAP00000001779 | OTU deubiquitinase 5. | ANK_REP_REGION domain-containing protein. | 0.427 |
RNF123 | USP11 | ENSACAP00000007572 | ENSACAP00000004936 | Ring finger protein 123. | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | 0.739 |
UBA1 | USP11 | ENSACAP00000005284 | ENSACAP00000004936 | Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family. | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | 0.499 |
UBA1 | uba7 | ENSACAP00000005284 | ENSACAP00000007251 | Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family. | UBA_e1_C domain-containing protein. | 0.905 |
USP1 | USP11 | ENSACAP00000007692 | ENSACAP00000004936 | Ubiquitin carboxyl-terminal hydrolase. | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | 0.674 |
USP1 | USP7 | ENSACAP00000007692 | ENSACAP00000005901 | Ubiquitin carboxyl-terminal hydrolase. | Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. | 0.576 |
USP1 | Usp30 | ENSACAP00000007692 | ENSACAP00000018026 | Ubiquitin carboxyl-terminal hydrolase. | USP domain-containing protein; Belongs to the peptidase C19 family. | 0.545 |
USP1 | brca2 | ENSACAP00000007692 | ENSACAP00000004459 | Ubiquitin carboxyl-terminal hydrolase. | Tower domain-containing protein. | 0.539 |
USP1 | uba7 | ENSACAP00000007692 | ENSACAP00000007251 | Ubiquitin carboxyl-terminal hydrolase. | UBA_e1_C domain-containing protein. | 0.477 |
USP11 | LOC103282118 | ENSACAP00000004936 | ENSACAP00000019877 | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | Peptidase_M16 domain-containing protein. | 0.517 |
USP11 | OTUD5 | ENSACAP00000004936 | ENSACAP00000007458 | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | OTU deubiquitinase 5. | 0.545 |
USP11 | RNF123 | ENSACAP00000004936 | ENSACAP00000007572 | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | Ring finger protein 123. | 0.739 |
USP11 | UBA1 | ENSACAP00000004936 | ENSACAP00000005284 | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family. | 0.499 |
USP11 | USP1 | ENSACAP00000004936 | ENSACAP00000007692 | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | Ubiquitin carboxyl-terminal hydrolase. | 0.674 |
USP11 | USP7 | ENSACAP00000004936 | ENSACAP00000005901 | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. | 0.743 |
USP11 | Usp30 | ENSACAP00000004936 | ENSACAP00000018026 | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | USP domain-containing protein; Belongs to the peptidase C19 family. | 0.555 |
USP11 | brca2 | ENSACAP00000004936 | ENSACAP00000004459 | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | Tower domain-containing protein. | 0.675 |
USP11 | nfkbia | ENSACAP00000004936 | ENSACAP00000001779 | Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. | ANK_REP_REGION domain-containing protein. | 0.681 |
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