STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP11Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. (911 aa)    
Predicted Functional Partners:
USP7
Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.
   
 0.743
RNF123
Ring finger protein 123.
   
 0.739
nfkbia
ANK_REP_REGION domain-containing protein.
     
 0.681
brca2
Tower domain-containing protein.
    
 
 0.675
USP1
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.674
uba7
UBA_e1_C domain-containing protein.
   
 
 0.633
Usp30
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 
 0.555
OTUD5
OTU deubiquitinase 5.
    
 
 0.545
LOC103282118
Peptidase_M16 domain-containing protein.
 
 
    0.517
UBA1
Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 
 0.499
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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