STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP11Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family (911 aa)    
Predicted Functional Partners:
UBA7
Ubiquitin-like modifier activating enzyme 7
   
 
 0.773
UBA1
Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family
   
 
 0.771
RBM10
RNA binding motif protein 10
   
  
 0.736
TRUB1
TruB pseudouridine (psi) synthase family member 1
   
   0.713
PSMC3
Proteasome (prosome, macropain) 26S subunit, ATPase, 3; Belongs to the AAA ATPase family
   
  
 0.708
USP7
Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family
   
 
 0.706
PSMA3
Proteasome (prosome, macropain) subunit, alpha type, 3
    
 
 0.680
USP1
Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family
   
  
 0.668
RANBP9
RAN binding protein 9
   
 
 0.665
XPC
XPC complex subunit, DNA damage recognition and repair factor; Xeroderma pigmentosum, complementation group C
   
 
 0.644
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Anolis carolinensis, Carolina anole, green anole
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