klc4 protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

klc4

TPR_REGION domain-containing protein. (636 aa)

Predicted Functional Partners:

KLC2

0.901

klc1

0.901

LEO1

0.886

KIF5C

0.834

KIF5B

0.834

KIF5A

0.751

KBTBD12

0.690

EML4

0.651

KIFAP3

0.649

KIF18A

0.632

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EML4	KBTBD12	ENSACAP00000014146	ENSACAP00000007151	EMAP like 4.	Kelch repeat and BTB domain containing 12.	0.650
EML4	KIF18A	ENSACAP00000014146	ENSACAP00000015450	EMAP like 4.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.431
EML4	klc4	ENSACAP00000014146	ENSACAP00000004997	EMAP like 4.	TPR_REGION domain-containing protein.	0.651
KBTBD12	EML4	ENSACAP00000007151	ENSACAP00000014146	Kelch repeat and BTB domain containing 12.	EMAP like 4.	0.650
KBTBD12	klc4	ENSACAP00000007151	ENSACAP00000004997	Kelch repeat and BTB domain containing 12.	TPR_REGION domain-containing protein.	0.690
KIF18A	EML4	ENSACAP00000015450	ENSACAP00000014146	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	EMAP like 4.	0.431
KIF18A	KIF5A	ENSACAP00000015450	ENSACAP00000022871	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.442
KIF18A	KIF5B	ENSACAP00000015450	ENSACAP00000007080	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.732
KIF18A	KIF5C	ENSACAP00000015450	ENSACAP00000003224	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.732
KIF18A	KIFAP3	ENSACAP00000015450	ENSACAP00000012735	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin associated protein 3.	0.811
KIF18A	KLC2	ENSACAP00000015450	ENSACAP00000003750	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin light chain 2.	0.632
KIF18A	klc1	ENSACAP00000015450	ENSACAP00000010529	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.632
KIF18A	klc4	ENSACAP00000015450	ENSACAP00000004997	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	TPR_REGION domain-containing protein.	0.632
KIF5A	KIF18A	ENSACAP00000022871	ENSACAP00000015450	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.442
KIF5A	KIF5B	ENSACAP00000022871	ENSACAP00000007080	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.903
KIF5A	KIF5C	ENSACAP00000022871	ENSACAP00000003224	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.902
KIF5A	KIFAP3	ENSACAP00000022871	ENSACAP00000012735	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin associated protein 3.	0.486
KIF5A	KLC2	ENSACAP00000022871	ENSACAP00000003750	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin light chain 2.	0.911
KIF5A	klc1	ENSACAP00000022871	ENSACAP00000010529	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.751
KIF5A	klc4	ENSACAP00000022871	ENSACAP00000004997	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	TPR_REGION domain-containing protein.	0.751