Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GTPBP4 | RPL18A | ENSACAP00000003022 | ENSACAP00000003034 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | 0.929 |
GTPBP4 | RPL23 | ENSACAP00000003022 | ENSACAP00000012883 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | 0.921 |
GTPBP4 | RPL23A | ENSACAP00000003022 | ENSACAP00000005194 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. | 0.971 |
GTPBP4 | RPL31 | ENSACAP00000003022 | ENSACAP00000007763 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.965 |
GTPBP4 | RPL4 | ENSACAP00000003022 | ENSACAP00000009632 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosomal protein L4. | 0.958 |
GTPBP4 | RSL24D1 | ENSACAP00000003022 | ENSACAP00000006768 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosomal L24 domain containing 1. | 0.999 |
GTPBP4 | eif6 | ENSACAP00000003022 | ENSACAP00000005375 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. | 0.997 |
GTPBP4 | rpl39 | ENSACAP00000003022 | ENSACAP00000003505 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosomal protein L39. | 0.949 |
RPL18A | GTPBP4 | ENSACAP00000003034 | ENSACAP00000003022 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.929 |
RPL18A | RPL23 | ENSACAP00000003034 | ENSACAP00000012883 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
RPL18A | RPL23A | ENSACAP00000003034 | ENSACAP00000005194 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
RPL18A | RPL24 | ENSACAP00000003034 | ENSACAP00000011760 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein L24. | 0.999 |
RPL18A | RPL31 | ENSACAP00000003034 | ENSACAP00000007763 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Uncharacterized protein. | 0.999 |
RPL18A | RPL4 | ENSACAP00000003034 | ENSACAP00000009632 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein L4. | 0.999 |
RPL18A | RSL24D1 | ENSACAP00000003034 | ENSACAP00000006768 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal L24 domain containing 1. | 0.986 |
RPL18A | eif6 | ENSACAP00000003034 | ENSACAP00000005375 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. | 0.999 |
RPL18A | rpl10 | ENSACAP00000003034 | ENSACAP00000008036 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal_L16 domain-containing protein. | 0.999 |
RPL18A | rpl39 | ENSACAP00000003034 | ENSACAP00000003505 | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | Ribosomal protein L39. | 0.999 |
RPL23 | GTPBP4 | ENSACAP00000012883 | ENSACAP00000003022 | Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.921 |
RPL23 | RPL18A | ENSACAP00000012883 | ENSACAP00000003034 | Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | 60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. | 0.999 |
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