STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN2LAtaxin 2 like. (962 aa)    
Predicted Functional Partners:
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
    
 
 0.947
LSM12
LSM12 homolog.
    
 
 0.917
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
    
 
 0.785
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.711
SNRPB
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.704
NAA38
N(alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
 
 0.704
NUFIP2
Nuclear FMR1 interacting protein 2.
    
 
 0.689
PABPC4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.652
PABPC1L
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.652
pabpc1
Uncharacterized protein.
   
 
 0.652
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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