STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM121Transmembrane protein 121. (312 aa)    
Predicted Functional Partners:
MITD1
Microtubule interacting and trafficking domain containing 1.
      
 0.636
PGLYRP2
Peptidoglycan recognition protein 2.
      
 0.626
mrpl30
Ribosomal_L30 domain-containing protein.
      
 0.532
TXNDC9
Thioredoxin domain containing 9.
      
 0.531
ids
Sulfatase domain-containing protein.
      
 0.531
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
      
 0.485
RD3L
Retinal degeneration 3 like.
      
 0.485
AKAP17A
A-kinase anchoring protein 17A.
      
 0.463
LOC100559170
RRM domain-containing protein.
      
 0.463
SIVA1
SIVA1 apoptosis inducing factor.
      
 0.434
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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