Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GATA1 | GATA2 | ENSACAP00000007715 | ENSACAP00000005678 | GATA binding protein 1. | GATA binding protein 2. | 0.717 |
GATA1 | GATA3 | ENSACAP00000007715 | ENSACAP00000008932 | GATA binding protein 1. | GATA binding protein 3. | 0.501 |
GATA1 | LDB1 | ENSACAP00000007715 | ENSACAP00000012144 | GATA binding protein 1. | LIM domain binding 1. | 0.731 |
GATA1 | LDB2 | ENSACAP00000007715 | ENSACAP00000008234 | GATA binding protein 1. | LIM domain binding 2. | 0.669 |
GATA1 | LMO1 | ENSACAP00000007715 | ENSACAP00000012420 | GATA binding protein 1. | LIM domain only 1. | 0.557 |
GATA1 | LMO2 | ENSACAP00000007715 | ENSACAP00000013528 | GATA binding protein 1. | LIM domain only 2. | 0.980 |
GATA1 | RUNX1 | ENSACAP00000007715 | ENSACAP00000005045 | GATA binding protein 1. | RUNX family transcription factor 1. | 0.667 |
GATA1 | TAL1 | ENSACAP00000007715 | ENSACAP00000005831 | GATA binding protein 1. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.943 |
GATA1 | TCF12 | ENSACAP00000007715 | ENSACAP00000014222 | GATA binding protein 1. | Transcription factor 12. | 0.443 |
GATA1 | TCF4 | ENSACAP00000007715 | ENSACAP00000008907 | GATA binding protein 1. | Transcription factor 4. | 0.443 |
GATA2 | GATA1 | ENSACAP00000005678 | ENSACAP00000007715 | GATA binding protein 2. | GATA binding protein 1. | 0.717 |
GATA2 | LDB1 | ENSACAP00000005678 | ENSACAP00000012144 | GATA binding protein 2. | LIM domain binding 1. | 0.727 |
GATA2 | LDB2 | ENSACAP00000005678 | ENSACAP00000008234 | GATA binding protein 2. | LIM domain binding 2. | 0.668 |
GATA2 | LMO1 | ENSACAP00000005678 | ENSACAP00000012420 | GATA binding protein 2. | LIM domain only 1. | 0.533 |
GATA2 | LMO2 | ENSACAP00000005678 | ENSACAP00000013528 | GATA binding protein 2. | LIM domain only 2. | 0.856 |
GATA2 | RUNX1 | ENSACAP00000005678 | ENSACAP00000005045 | GATA binding protein 2. | RUNX family transcription factor 1. | 0.652 |
GATA2 | TAL1 | ENSACAP00000005678 | ENSACAP00000005831 | GATA binding protein 2. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.908 |
GATA3 | GATA1 | ENSACAP00000008932 | ENSACAP00000007715 | GATA binding protein 3. | GATA binding protein 1. | 0.501 |
GATA3 | LDB1 | ENSACAP00000008932 | ENSACAP00000012144 | GATA binding protein 3. | LIM domain binding 1. | 0.680 |
GATA3 | LDB2 | ENSACAP00000008932 | ENSACAP00000008234 | GATA binding protein 3. | LIM domain binding 2. | 0.680 |
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