STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPATNuclear protein, coactivator of histone transcription. (1413 aa)    
Predicted Functional Partners:
HCCS
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
    
 
 0.582
IQCB1
IQ motif containing B1.
   
 
 0.562
CASP8AP2
Caspase 8 associated protein 2.
   
 
 0.551
HINFP
Histone H4 transcription factor.
    
 
 0.546
Lsm11
Uncharacterized protein.
      
 0.536
LSM10
LSM10, U7 small nuclear RNA associated.
      
 0.529
COIL
Coilin.
    
 0.512
RBM46
RNA binding motif protein 46.
    
 
 0.459
GXYLT1
Glucoside xylosyltransferase 1.
    
 
 0.455
DISP1
Dispatched RND transporter family member 1.
     
 0.444
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.