STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTK6Tyrosine-protein kinase. (452 aa)    
Predicted Functional Partners:
CSK
Tyrosine-protein kinase.
  
0.706
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
    
 0.651
LYN
Tyrosine-protein kinase.
  
0.633
MST1R
Macrophage stimulating 1 receptor.
  
 
0.632
MET
MET proto-oncogene, receptor tyrosine kinase.
    
0.613
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
   
 0.612
PAG1
Phosphoprotein membrane anchor with glycosphingolipid microdomains 1.
    
 0.596
SYK
Tyrosine-protein kinase.
  
0.584
GRB2
Growth factor receptor bound protein 2.
   
0.553
STAP2
Signal transducing adaptor family member 2.
   
 0.553
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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