STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE1Spectrin repeat containing nuclear envelope protein 1. (8805 aa)    
Predicted Functional Partners:
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.910
sun1
Uncharacterized protein.
    
 0.820
LOC100552827
SUN domain-containing protein.
    
 0.699
IFT81
Intraflagellar transport 81.
      
 0.624
POPDC2
Popeye domain containing 2.
      
 0.581
DTNA
Dystrobrevin alpha.
      
 0.581
LOC100566393
SUN domain-containing protein.
    
 0.559
ITSN2
Intersectin 2.
    
  0.557
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.517
H9G3M3_ANOCA
GBD/FH3 domain-containing protein.
    
 
 0.485
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.