Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANKRD16 | PCMTD2 | ENSACAP00000002903 | ENSACAP00000006092 | Ankyrin repeat domain 16. | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | 0.404 |
EPRS1 | PCMTD2 | ENSACAP00000001345 | ENSACAP00000006092 | Glutamyl-prolyl-tRNA synthetase. | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | 0.430 |
PCMTD2 | ANKRD16 | ENSACAP00000006092 | ENSACAP00000002903 | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | Ankyrin repeat domain 16. | 0.404 |
PCMTD2 | EPRS1 | ENSACAP00000006092 | ENSACAP00000001345 | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | Glutamyl-prolyl-tRNA synthetase. | 0.430 |
PCMTD2 | WDYHV1 | ENSACAP00000006092 | ENSACAP00000009494 | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | WDYHV motif containing 1. | 0.405 |
PCMTD2 | slc25a32 | ENSACAP00000006092 | ENSACAP00000009246 | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.400 |
WDYHV1 | PCMTD2 | ENSACAP00000009494 | ENSACAP00000006092 | WDYHV motif containing 1. | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | 0.405 |
slc25a32 | PCMTD2 | ENSACAP00000009246 | ENSACAP00000006092 | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. | 0.400 |