STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID5AAT-rich interaction domain 5A. (559 aa)    
Predicted Functional Partners:
washc2c
CAP-ZIP_m domain-containing protein.
   
  
 0.791
POLR3D
RNA polymerase III subunit D.
      
 0.667
MAPKAPK2
MAPK activated protein kinase 2; Belongs to the protein kinase superfamily.
      
 0.659
SAP30L
SAP30 like.
    
 0.598
SAP30
Sin3A associated protein 30.
    
 0.598
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 
 0.596
ZFP36L2
ZFP36 ring finger protein like 2.
   
  
 0.551
PBRM1
Polybromo 1.
   
 
 0.549
rbbp4
RB binding protein 4, chromatin remodeling factor.
    
 0.530
BRMS1L
BRMS1 like transcriptional repressor.
    
 0.526
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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