STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB23RAB23, member RAS oncogene family. (238 aa)    
Predicted Functional Partners:
ARL3
ADP ribosylation factor like GTPase 3.
    
 0.700
Rab44
Uncharacterized protein.
     
 0.649
CPLANE2
Ciliogenesis and planar polarity effector 2.
    
 0.642
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
     
 0.606
chm
Uncharacterized protein.
   
 
 0.599
arl2
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
      
 0.571
SMO
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 
 0.571
IFT22
Intraflagellar transport 22.
      
 0.564
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
     
 0.549
SUFU
Suppressor of fused homolog.
      
 0.548
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.