STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHG1Pleckstrin homology and RhoGEF domain containing G1. (1363 aa)    
Predicted Functional Partners:
LOC103280480
PID domain-containing protein.
      
 0.688
TNS4
Tensin 4.
      
 0.602
KCNK1
Potassium channel subfamily K member.
      
 0.601
ZMAT4
Zinc finger matrin-type 4.
      
 0.593
HS3ST1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.593
CNTN1
Contactin 1.
      
 0.587
RORC
RAR related orphan receptor C.
      
 0.585
IYD
Iodotyrosine deiodinase.
      
 0.554
CDC42
Uncharacterized protein.
    
 0.519
PSD2
Pleckstrin and Sec7 domain containing 2.
      
 0.513
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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