STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCM1Pericentriolar material 1. (2007 aa)    
Predicted Functional Partners:
BBS4
Bardet-Biedl syndrome 4.
   
 
 0.860
PLK1
Polo like kinase 1.
    
 0.768
CEP290
Centrosomal protein 290.
   
 
 0.759
CEP72
Centrosomal protein 72.
    
 
 0.754
PLK4
Polo like kinase 4.
    
 0.729
OFD1
OFD1 centriole and centriolar satellite protein.
   
 
 0.695
pcnt
PACT_coil_coil domain-containing protein.
   
 0.690
CEP131
Centrosomal protein 131.
    
 0.665
sdccag8
Uncharacterized protein.
   
 
 0.646
HOOK3
Hook microtubule tethering protein 3.
   
 
 0.636
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.