STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRP1Neuropilin; Belongs to the neuropilin family. (912 aa)    
Predicted Functional Partners:
SEMA3A
Semaphorin 3A; Belongs to the semaphorin family.
    
 0.967
SEMA3C
Semaphorin 3C; Belongs to the semaphorin family.
  
 
 0.921
SEMA3B
Semaphorin 3B; Belongs to the semaphorin family.
    
 0.904
KDR
Kinase insert domain receptor.
    
 0.900
PLXND1
Plexin D1.
    
 0.894
plxna1
Plexin A1.
    
 0.794
SEMA3F
Semaphorin 3F; Belongs to the semaphorin family.
    
 0.794
plxna4
Plexin A4.
    
 0.784
SEMA3E
Semaphorin 3E; Belongs to the semaphorin family.
    
 0.773
PLXNA2
Plexin A2.
    
 0.770
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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