STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD2Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. (759 aa)    
Predicted Functional Partners:
LOC103282406
Uncharacterized protein.
  
0.965
LOC100556788
Uncharacterized protein.
   
0.946
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
  
  
 
0.901
CRTAP
Cartilage associated protein.
   
 
 0.705
FKBP10
Peptidylprolyl isomerase.
   
  
 0.696
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
  0.691
Nsd1
Uncharacterized protein.
    
 0.677
SETD7
SET domain containing 7, histone lysine methyltransferase.
   
 0.674
SERPINF1
Serpin family F member 1; Belongs to the serpin family.
      
 0.674
SMYD2
SET and MYND domain containing 2.
   
 0.672
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.