Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTH | LOC103281780 | ENSACAP00000013340 | ENSACAP00000020161 | Cystathionine gamma-lyase. | Aminotran_5 domain-containing protein. | 0.706 |
CTH | SCLY | ENSACAP00000013340 | ENSACAP00000006359 | Cystathionine gamma-lyase. | Selenocysteine lyase. | 0.507 |
CTH | SUOX | ENSACAP00000013340 | ENSACAP00000005234 | Cystathionine gamma-lyase. | Sulfite oxidase. | 0.724 |
CTH | Tstd3 | ENSACAP00000013340 | ENSACAP00000010159 | Cystathionine gamma-lyase. | Rhodanese domain-containing protein. | 0.746 |
CTH | mocos | ENSACAP00000013340 | ENSACAP00000006972 | Cystathionine gamma-lyase. | MOSC domain-containing protein. | 0.706 |
CTH | nfs1 | ENSACAP00000013340 | ENSACAP00000006267 | Cystathionine gamma-lyase. | Aminotran_5 domain-containing protein. | 0.507 |
FXN | GPHN | ENSACAP00000001162 | ENSACAP00000006190 | Frataxin. | Gephyrin. | 0.405 |
FXN | ISCU | ENSACAP00000001162 | ENSACAP00000001059 | Frataxin. | Iron-sulfur cluster assembly enzyme. | 0.999 |
FXN | LOC103281780 | ENSACAP00000001162 | ENSACAP00000020161 | Frataxin. | Aminotran_5 domain-containing protein. | 0.825 |
FXN | NFU1 | ENSACAP00000001162 | ENSACAP00000009433 | Frataxin. | NFU1 iron-sulfur cluster scaffold. | 0.780 |
FXN | SCLY | ENSACAP00000001162 | ENSACAP00000006359 | Frataxin. | Selenocysteine lyase. | 0.984 |
FXN | SUOX | ENSACAP00000001162 | ENSACAP00000005234 | Frataxin. | Sulfite oxidase. | 0.634 |
FXN | mocos | ENSACAP00000001162 | ENSACAP00000006972 | Frataxin. | MOSC domain-containing protein. | 0.825 |
FXN | nfs1 | ENSACAP00000001162 | ENSACAP00000006267 | Frataxin. | Aminotran_5 domain-containing protein. | 0.995 |
GPHN | FXN | ENSACAP00000006190 | ENSACAP00000001162 | Gephyrin. | Frataxin. | 0.405 |
GPHN | LOC103281780 | ENSACAP00000006190 | ENSACAP00000020161 | Gephyrin. | Aminotran_5 domain-containing protein. | 0.521 |
GPHN | SUOX | ENSACAP00000006190 | ENSACAP00000005234 | Gephyrin. | Sulfite oxidase. | 0.738 |
GPHN | Tstd3 | ENSACAP00000006190 | ENSACAP00000010159 | Gephyrin. | Rhodanese domain-containing protein. | 0.616 |
GPHN | mocos | ENSACAP00000006190 | ENSACAP00000006972 | Gephyrin. | MOSC domain-containing protein. | 0.950 |
ISCU | FXN | ENSACAP00000001059 | ENSACAP00000001162 | Iron-sulfur cluster assembly enzyme. | Frataxin. | 0.999 |
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