STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPEL4Protein yippee-like; Belongs to the yippee family. (127 aa)    
Predicted Functional Partners:
WDR26
WD repeat domain 26.
   
 
 0.635
RANBP10
RAN binding protein 10.
   
 
 0.518
RANBP9
RAN binding protein 9.
   
 
 0.518
ARMC8
Armadillo repeat containing 8.
    
 0.510
RMND5B
Required for meiotic nuclear division 5 homolog B.
    
 
 0.485
RMND5A
Required for meiotic nuclear division 5 homolog A.
    
 
 0.485
GID8
GID complex subunit 8 homolog.
    
 
 0.469
SPRYD3
SPRY domain containing 3.
   
 
 0.434
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.