STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF277Zinc finger protein 277. (481 aa)    
Predicted Functional Partners:
pdcd2l
PDCD2_C domain-containing protein.
   
 
 0.623
PDCD2
Programmed cell death 2.
   
 
 0.571
TMEM186
Transmembrane protein 186.
      
 0.541
ZMAT2
Zinc finger matrin-type 2.
      
 0.523
TMEM258
Transmembrane protein 258.
      
 0.520
RSRC2
Arginine and serine rich coiled-coil 2.
    
 
 0.461
ORC3
Origin recognition complex subunit 3.
   
 
 0.448
ORC2
Origin recognition complex subunit 2.
    
 
 0.426
PRMT3
Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
  
 0.411
ZMAT5
Zinc finger matrin-type 5.
      
 0.405
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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