STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STX4Syntaxin 4; Belongs to the syntaxin family. (300 aa)    
Predicted Functional Partners:
VAMP4
Vesicle associated membrane protein 4.
    
 0.971
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.964
VAMP1
Vesicle associated membrane protein 1.
   
 0.959
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.951
vamp2
V-SNARE coiled-coil homology domain-containing protein.
   
 0.939
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.938
VAMP3
Vesicle associated membrane protein 3.
    
 0.935
LOC100556505
V-SNARE coiled-coil homology domain-containing protein.
   
 0.886
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
    
 0.863
STX5
Syntaxin 5; Belongs to the syntaxin family.
    
 0.842
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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