STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pdcd5Uncharacterized protein. (60 aa)    
Predicted Functional Partners:
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.924
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
    0.907
RPL35
Ribosomal protein L35.
   
    0.873
RPL23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
  
 0.863
rps3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
    0.854
LOC100555038
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
    0.846
RPL23A
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
    0.844
RPLP0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
    0.836
PFDN1
Prefoldin subunit 1.
   
    0.825
RPS24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
    0.796
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.