STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC27Leucine rich repeat containing 27. (507 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 0.903
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.858
CNOT3
CCR4-NOT transcription complex subunit 3.
    
 0.851
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.846
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 0.826
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.826
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.822
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
    
 0.767
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 0.695
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 0.676
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (24%) [HD]