Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APP | CTRL | ENSACAP00000014509 | ENSACAP00000001728 | Amyloid beta precursor protein. | Chymotrypsin like; Belongs to the peptidase S1 family. | 0.538 |
APP | LOC100565795 | ENSACAP00000014509 | ENSACAP00000007752 | Amyloid beta precursor protein. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.680 |
APP | ctrb2 | ENSACAP00000014509 | ENSACAP00000006632 | Amyloid beta precursor protein. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.538 |
CTRL | APP | ENSACAP00000001728 | ENSACAP00000014509 | Chymotrypsin like; Belongs to the peptidase S1 family. | Amyloid beta precursor protein. | 0.538 |
CTRL | LOC100565795 | ENSACAP00000001728 | ENSACAP00000007752 | Chymotrypsin like; Belongs to the peptidase S1 family. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.533 |
CTRL | MET | ENSACAP00000001728 | ENSACAP00000008564 | Chymotrypsin like; Belongs to the peptidase S1 family. | MET proto-oncogene, receptor tyrosine kinase. | 0.560 |
CTRL | MST1R | ENSACAP00000001728 | ENSACAP00000008269 | Chymotrypsin like; Belongs to the peptidase S1 family. | Macrophage stimulating 1 receptor. | 0.560 |
F2R | F2RL2 | ENSACAP00000007808 | ENSACAP00000008135 | Coagulation factor II thrombin receptor; Belongs to the G-protein coupled receptor 1 family. | Coagulation factor II thrombin receptor like 2. | 0.904 |
F2R | LOC100565795 | ENSACAP00000007808 | ENSACAP00000007752 | Coagulation factor II thrombin receptor; Belongs to the G-protein coupled receptor 1 family. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.686 |
F2R | PARD3 | ENSACAP00000007808 | ENSACAP00000001090 | Coagulation factor II thrombin receptor; Belongs to the G-protein coupled receptor 1 family. | Par-3 family cell polarity regulator. | 0.901 |
F2RL2 | F2R | ENSACAP00000008135 | ENSACAP00000007808 | Coagulation factor II thrombin receptor like 2. | Coagulation factor II thrombin receptor; Belongs to the G-protein coupled receptor 1 family. | 0.904 |
F2RL2 | LOC100565795 | ENSACAP00000008135 | ENSACAP00000007752 | Coagulation factor II thrombin receptor like 2. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.730 |
F2RL2 | PARD3 | ENSACAP00000008135 | ENSACAP00000001090 | Coagulation factor II thrombin receptor like 2. | Par-3 family cell polarity regulator. | 0.901 |
LOC100565795 | APP | ENSACAP00000007752 | ENSACAP00000014509 | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | Amyloid beta precursor protein. | 0.680 |
LOC100565795 | CTRL | ENSACAP00000007752 | ENSACAP00000001728 | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | Chymotrypsin like; Belongs to the peptidase S1 family. | 0.533 |
LOC100565795 | F2R | ENSACAP00000007752 | ENSACAP00000007808 | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | Coagulation factor II thrombin receptor; Belongs to the G-protein coupled receptor 1 family. | 0.686 |
LOC100565795 | F2RL2 | ENSACAP00000007752 | ENSACAP00000008135 | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | Coagulation factor II thrombin receptor like 2. | 0.730 |
LOC100565795 | MET | ENSACAP00000007752 | ENSACAP00000008564 | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | MET proto-oncogene, receptor tyrosine kinase. | 0.560 |
LOC100565795 | MST1R | ENSACAP00000007752 | ENSACAP00000008269 | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | Macrophage stimulating 1 receptor. | 0.560 |
LOC100565795 | PARD3 | ENSACAP00000007752 | ENSACAP00000001090 | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | Par-3 family cell polarity regulator. | 0.650 |
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