STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103278943N-acetyltransferase domain-containing protein. (284 aa)    
Predicted Functional Partners:
SKP2
S-phase kinase associated protein 2.
   
 0.747
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.712
CCNJL
Cyclin J like; Belongs to the cyclin family.
   
 0.599
CCNA1
Cyclin A1; Belongs to the cyclin family.
   
 0.599
CCNJ
Cyclin J; Belongs to the cyclin family.
   
 0.599
CCNA2
Cyclin A2; Belongs to the cyclin family.
   
 0.599
rps27a
Ubiquitin-like domain-containing protein.
    
  0.539
CDK15
Cyclin dependent kinase 15.
   
 0.512
CDK16
Cyclin dependent kinase 16.
   
 0.512
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.512
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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