DPYSL5 protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DPYSL5

Dihydropyrimidinase like 5. (564 aa)

Predicted Functional Partners:

DPYD

0.745

dhodh

0.734

LOC100565628

0.682

GART

0.682

GOLT1B

0.661

GOLT1A

0.661

LOC103282097

0.611

GPR143

0.611

TMEM116

0.611

CPS1

0.611

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPS1	DPYD	ENSACAP00000010356	ENSACAP00000005445	Carbamoyl-phosphate synthase 1.	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	0.778
CPS1	DPYSL5	ENSACAP00000010356	ENSACAP00000008075	Carbamoyl-phosphate synthase 1.	Dihydropyrimidinase like 5.	0.611
CPS1	GART	ENSACAP00000010356	ENSACAP00000004546	Carbamoyl-phosphate synthase 1.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.848
CPS1	GOLT1A	ENSACAP00000010356	ENSACAP00000022693	Carbamoyl-phosphate synthase 1.	Golgi transport 1A.	0.657
CPS1	GOLT1B	ENSACAP00000010356	ENSACAP00000017101	Carbamoyl-phosphate synthase 1.	Golgi transport 1B.	0.657
CPS1	LOC100565628	ENSACAP00000010356	ENSACAP00000004296	Carbamoyl-phosphate synthase 1.	ATP-grasp domain-containing protein.	0.848
CPS1	dhodh	ENSACAP00000010356	ENSACAP00000007934	Carbamoyl-phosphate synthase 1.	DHO_dh domain-containing protein.	0.836
DPYD	CPS1	ENSACAP00000005445	ENSACAP00000010356	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	Carbamoyl-phosphate synthase 1.	0.778
DPYD	DPYSL5	ENSACAP00000005445	ENSACAP00000008075	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	Dihydropyrimidinase like 5.	0.745
DPYD	GART	ENSACAP00000005445	ENSACAP00000004546	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.837
DPYD	GOLT1A	ENSACAP00000005445	ENSACAP00000022693	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	Golgi transport 1A.	0.919
DPYD	GOLT1B	ENSACAP00000005445	ENSACAP00000017101	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	Golgi transport 1B.	0.919
DPYD	GPR143	ENSACAP00000005445	ENSACAP00000000661	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	G protein-coupled receptor 143.	0.777
DPYD	LOC100565628	ENSACAP00000005445	ENSACAP00000004296	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	ATP-grasp domain-containing protein.	0.837
DPYD	LOC103282097	ENSACAP00000005445	ENSACAP00000000002	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	Uncharacterized protein.	0.778
DPYD	TMEM116	ENSACAP00000005445	ENSACAP00000009173	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	Transmembrane protein 116.	0.777
DPYD	dhodh	ENSACAP00000005445	ENSACAP00000007934	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	DHO_dh domain-containing protein.	0.541
DPYSL5	CPS1	ENSACAP00000008075	ENSACAP00000010356	Dihydropyrimidinase like 5.	Carbamoyl-phosphate synthase 1.	0.611
DPYSL5	DPYD	ENSACAP00000008075	ENSACAP00000005445	Dihydropyrimidinase like 5.	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	0.745
DPYSL5	GART	ENSACAP00000008075	ENSACAP00000004546	Dihydropyrimidinase like 5.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.682