Mrm2 protein (Anolis carolinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Mrm2

FtsJ domain-containing protein. (240 aa)

Predicted Functional Partners:

WDR6

0.875

NOP58

0.865

GTPBP4

0.859

NOC2L

0.853

MTG2

0.852

PES1

0.848

NSA2

0.842

EBNA1BP2

0.840

RSL24D1

0.838

MTG1

0.825

Your Current Organism:

Anolis carolinensis

NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EBNA1BP2	GTPBP4	ENSACAP00000012979	ENSACAP00000003022	EBNA1 binding protein 2.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.993
EBNA1BP2	MTG1	ENSACAP00000012979	ENSACAP00000011627	EBNA1 binding protein 2.	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.808
EBNA1BP2	Mrm2	ENSACAP00000012979	ENSACAP00000008877	EBNA1 binding protein 2.	FtsJ domain-containing protein.	0.840
EBNA1BP2	NOC2L	ENSACAP00000012979	ENSACAP00000008439	EBNA1 binding protein 2.	NOC2 like nucleolar associated transcriptional repressor.	0.999
EBNA1BP2	NOP58	ENSACAP00000012979	ENSACAP00000005070	EBNA1 binding protein 2.	NOP58 ribonucleoprotein.	0.979
EBNA1BP2	NSA2	ENSACAP00000012979	ENSACAP00000008798	EBNA1 binding protein 2.	NSA2 ribosome biogenesis factor.	0.982
EBNA1BP2	PES1	ENSACAP00000012979	ENSACAP00000009549	EBNA1 binding protein 2.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
EBNA1BP2	RSL24D1	ENSACAP00000012979	ENSACAP00000006768	EBNA1 binding protein 2.	Ribosomal L24 domain containing 1.	0.993
GTPBP4	EBNA1BP2	ENSACAP00000003022	ENSACAP00000012979	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	EBNA1 binding protein 2.	0.993
GTPBP4	MTG1	ENSACAP00000003022	ENSACAP00000011627	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.823
GTPBP4	Mrm2	ENSACAP00000003022	ENSACAP00000008877	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	FtsJ domain-containing protein.	0.859
GTPBP4	NOC2L	ENSACAP00000003022	ENSACAP00000008439	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	NOC2 like nucleolar associated transcriptional repressor.	0.998
GTPBP4	NOP58	ENSACAP00000003022	ENSACAP00000005070	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	NOP58 ribonucleoprotein.	0.970
GTPBP4	NSA2	ENSACAP00000003022	ENSACAP00000008798	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	NSA2 ribosome biogenesis factor.	0.999
GTPBP4	PES1	ENSACAP00000003022	ENSACAP00000009549	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
GTPBP4	RSL24D1	ENSACAP00000003022	ENSACAP00000006768	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	Ribosomal L24 domain containing 1.	0.999
GTPBP4	WDR6	ENSACAP00000003022	ENSACAP00000012125	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	WD repeat domain 6.	0.457
MTG1	EBNA1BP2	ENSACAP00000011627	ENSACAP00000012979	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	EBNA1 binding protein 2.	0.808
MTG1	GTPBP4	ENSACAP00000011627	ENSACAP00000003022	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.823
MTG1	MTG2	ENSACAP00000011627	ENSACAP00000015801	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Mitochondrial ribosome associated GTPase 2.	0.814