STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN18Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (256 aa)    
Predicted Functional Partners:
DNAJC19
DnaJ heat shock protein family (Hsp40) member C19.
      
 0.635
LGALS3
Galectin.
      
 0.622
H9GUR8_ANOCA
SEA domain-containing protein.
      
 0.607
TTC14
Tetratricopeptide repeat domain 14.
      
 0.568
ARHGAP26
Rho GTPase activating protein 26.
      
 0.503
PEX3
Peroxisomal biogenesis factor 3.
     
 0.483
LOC100558313
Uncharacterized protein.
      
 0.481
PDCD4
Programmed cell death 4.
      
 0.481
DNAJC15
DnaJ heat shock protein family (Hsp40) member C15.
      
 0.474
THBS2
Thrombospondin 2.
      
 0.453
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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