STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM8Zinc finger SWIM-type containing 8. (1788 aa)    
Predicted Functional Partners:
CUL2
Cullin 2; Belongs to the cullin family.
     
 0.808
RBX1
Ring-box 1.
     
 0.639
H9G5I0_ANOCA
Uncharacterized protein.
      
 0.636
ELOB
Elongin B.
    
 0.553
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.553
ZSWIM6
Zinc finger SWIM-type containing 6.
     
0.545
ZSWIM4
Zinc finger SWIM-type containing 4.
     
0.545
ZSWIM5
Zinc finger SWIM-type containing 5.
     
0.545
appbp2
Uncharacterized protein.
     
 0.545
zyg11b
Zyg-11 family member B, cell cycle regulator.
     
  0.540
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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