STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND1BUDENN domain-containing protein. (780 aa)    
Predicted Functional Partners:
RAB35
RAB35, member RAS oncogene family.
    
 0.969
LOC100559953
Uncharacterized protein.
    
 0.775
DENND1A
DENN domain containing 1A.
     
0.673
IFT27
Intraflagellar transport 27.
    
 0.607
SUOX
Sulfite oxidase.
      
 0.578
RAB21
RAB21, member RAS oncogene family.
      
 0.563
chm
Uncharacterized protein.
   
 
  0.562
RAB22A
RAB22A, member RAS oncogene family.
      
 0.483
ITSN2
Intersectin 2.
    
 
 0.449
rab28
Uncharacterized protein.
     
 0.434
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (28%) [HD]