Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALKBH5 | DDX46 | ENSACAP00000009439 | ENSACAP00000001475 | AlkB homolog 5, RNA demethylase. | DEAD-box helicase 46. | 0.680 |
ALKBH5 | FTO | ENSACAP00000009439 | ENSACAP00000016205 | AlkB homolog 5, RNA demethylase. | FTO alpha-ketoglutarate dependent dioxygenase. | 0.923 |
ALKBH5 | METTL14 | ENSACAP00000009439 | ENSACAP00000013426 | AlkB homolog 5, RNA demethylase. | Methyltransferase like 14; Belongs to the MT-A70-like family. | 0.898 |
ALKBH5 | METTL16 | ENSACAP00000009439 | ENSACAP00000016637 | AlkB homolog 5, RNA demethylase. | U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] | 0.686 |
ALKBH5 | RBM15B | ENSACAP00000009439 | ENSACAP00000007519 | AlkB homolog 5, RNA demethylase. | RNA binding motif protein 15B. | 0.757 |
ALKBH5 | WTAP | ENSACAP00000009439 | ENSACAP00000004375 | AlkB homolog 5, RNA demethylase. | WT1 associated protein. | 0.897 |
ALKBH5 | YTHDC1 | ENSACAP00000009439 | ENSACAP00000009566 | AlkB homolog 5, RNA demethylase. | YTH domain containing 1. | 0.777 |
ALKBH5 | YTHDC2 | ENSACAP00000009439 | ENSACAP00000007635 | AlkB homolog 5, RNA demethylase. | YTH domain containing 2. | 0.849 |
ALKBH5 | YTHDF1 | ENSACAP00000009439 | ENSACAP00000005432 | AlkB homolog 5, RNA demethylase. | YTH N6-methyladenosine RNA binding protein 1. | 0.877 |
ALKBH5 | YTHDF2 | ENSACAP00000009439 | ENSACAP00000010650 | AlkB homolog 5, RNA demethylase. | YTH N6-methyladenosine RNA binding protein 2. | 0.781 |
DDX46 | ALKBH5 | ENSACAP00000001475 | ENSACAP00000009439 | DEAD-box helicase 46. | AlkB homolog 5, RNA demethylase. | 0.680 |
DDX46 | YTHDC2 | ENSACAP00000001475 | ENSACAP00000007635 | DEAD-box helicase 46. | YTH domain containing 2. | 0.529 |
FTO | ALKBH5 | ENSACAP00000016205 | ENSACAP00000009439 | FTO alpha-ketoglutarate dependent dioxygenase. | AlkB homolog 5, RNA demethylase. | 0.923 |
FTO | METTL14 | ENSACAP00000016205 | ENSACAP00000013426 | FTO alpha-ketoglutarate dependent dioxygenase. | Methyltransferase like 14; Belongs to the MT-A70-like family. | 0.745 |
FTO | METTL16 | ENSACAP00000016205 | ENSACAP00000016637 | FTO alpha-ketoglutarate dependent dioxygenase. | U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] | 0.587 |
FTO | RBM15B | ENSACAP00000016205 | ENSACAP00000007519 | FTO alpha-ketoglutarate dependent dioxygenase. | RNA binding motif protein 15B. | 0.552 |
FTO | WTAP | ENSACAP00000016205 | ENSACAP00000004375 | FTO alpha-ketoglutarate dependent dioxygenase. | WT1 associated protein. | 0.713 |
FTO | YTHDC1 | ENSACAP00000016205 | ENSACAP00000009566 | FTO alpha-ketoglutarate dependent dioxygenase. | YTH domain containing 1. | 0.625 |
FTO | YTHDC2 | ENSACAP00000016205 | ENSACAP00000007635 | FTO alpha-ketoglutarate dependent dioxygenase. | YTH domain containing 2. | 0.546 |
FTO | YTHDF1 | ENSACAP00000016205 | ENSACAP00000005432 | FTO alpha-ketoglutarate dependent dioxygenase. | YTH N6-methyladenosine RNA binding protein 1. | 0.690 |
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