STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpf2Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
LOC100563506
Uncharacterized protein.
 
      0.888
PBRM1
Polybromo 1.
    
 
 0.838
BRD9
Bromodomain containing 9.
    
 
 0.773
BRD7
Bromodomain containing 7.
    
 
 0.748
ARID1B
AT-rich interaction domain 1B.
    
 
 0.725
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 
 0.626
BCL7C
BAF chromatin remodeling complex subunit BCL7C.
    
 
 0.619
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
    
 
 0.609
BCL7A
BAF chromatin remodeling complex subunit BCL7A.
    
 
 0.605
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 
 0.600
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.