STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAT1LVesicle amine transport 1 like. (342 aa)    
Predicted Functional Partners:
CLEC3A
C-type lectin domain family 3 member A.
 
    
 0.597
WWOX
WW domain containing oxidoreductase.
   
 0.576
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.575
R4G930_ANOCA
PKS_KS domain-containing protein.
 
 0.560
FASN
Fatty acid synthase.
  
0.520
adhfe1
Fe-ADH domain-containing protein.
     
 0.494
HPD
4-hydroxyphenylpyruvate dioxygenase.
     
 0.469
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.425
cryzl1
PKS_ER domain-containing protein.
  
     0.416
KRT23
Keratin 23; Belongs to the intermediate filament family.
      
 0.405
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.