STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALB1Calbindin 1. (262 aa)    
Predicted Functional Partners:
PVALB
Parvalbumin; Belongs to the parvalbumin family.
      
 0.870
SST
Somatostatin.
   
  
 0.713
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.680
GFAP
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
 0.660
NPY
Neuropeptide Y.
      
 0.633
TH
Tyrosine hydroxylase.
      
 0.625
NTS
Neurotensin.
      
 0.624
PAX6
Paired box 6.
   
  
 0.622
DCX
Doublecortin.
     
 0.567
TBR1
T-box brain transcription factor 1.
     
 0.556
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.