Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASK | GRIA4 | ENSACAP00000022545 | ENSACAP00000011596 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Glutamate ionotropic receptor AMPA type subunit 4. | 0.719 |
CASK | GRIN1 | ENSACAP00000022545 | ENSACAP00000001568 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Glutamate ionotropic receptor NMDA type subunit 1. | 0.987 |
CASK | GRIN2A | ENSACAP00000022545 | ENSACAP00000000881 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Glutamate ionotropic receptor NMDA type subunit 2A. | 0.839 |
CASK | GRIN2B | ENSACAP00000022545 | ENSACAP00000010352 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Glutamate ionotropic receptor NMDA type subunit 2B. | 0.854 |
CASK | GRIN2C | ENSACAP00000022545 | ENSACAP00000022617 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Glutamate ionotropic receptor NMDA type subunit 2C. | 0.812 |
CASK | GRIN2D | ENSACAP00000022545 | ENSACAP00000016032 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Glutamate ionotropic receptor NMDA type subunit 2D. | 0.812 |
CASK | GRIN3A | ENSACAP00000022545 | ENSACAP00000010837 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. | 0.812 |
CASK | GRIN3B | ENSACAP00000022545 | ENSACAP00000010805 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Glutamate ionotropic receptor NMDA type subunit 3B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. | 0.812 |
GRIA4 | CASK | ENSACAP00000011596 | ENSACAP00000022545 | Glutamate ionotropic receptor AMPA type subunit 4. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.719 |
GRIA4 | GRIN1 | ENSACAP00000011596 | ENSACAP00000001568 | Glutamate ionotropic receptor AMPA type subunit 4. | Glutamate ionotropic receptor NMDA type subunit 1. | 0.757 |
GRIA4 | GRIN2A | ENSACAP00000011596 | ENSACAP00000000881 | Glutamate ionotropic receptor AMPA type subunit 4. | Glutamate ionotropic receptor NMDA type subunit 2A. | 0.786 |
GRIA4 | GRIN2B | ENSACAP00000011596 | ENSACAP00000010352 | Glutamate ionotropic receptor AMPA type subunit 4. | Glutamate ionotropic receptor NMDA type subunit 2B. | 0.769 |
GRIA4 | GRIN2C | ENSACAP00000011596 | ENSACAP00000022617 | Glutamate ionotropic receptor AMPA type subunit 4. | Glutamate ionotropic receptor NMDA type subunit 2C. | 0.617 |
GRIA4 | GRIN2D | ENSACAP00000011596 | ENSACAP00000016032 | Glutamate ionotropic receptor AMPA type subunit 4. | Glutamate ionotropic receptor NMDA type subunit 2D. | 0.725 |
GRIA4 | GRIN3A | ENSACAP00000011596 | ENSACAP00000010837 | Glutamate ionotropic receptor AMPA type subunit 4. | Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. | 0.416 |
GRIA4 | camk2a | ENSACAP00000011596 | ENSACAP00000011742 | Glutamate ionotropic receptor AMPA type subunit 4. | Protein kinase domain-containing protein. | 0.438 |
GRIA4 | camk2d | ENSACAP00000011596 | ENSACAP00000011591 | Glutamate ionotropic receptor AMPA type subunit 4. | Protein kinase domain-containing protein. | 0.438 |
GRIN1 | CASK | ENSACAP00000001568 | ENSACAP00000022545 | Glutamate ionotropic receptor NMDA type subunit 1. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.987 |
GRIN1 | GRIA4 | ENSACAP00000001568 | ENSACAP00000011596 | Glutamate ionotropic receptor NMDA type subunit 1. | Glutamate ionotropic receptor AMPA type subunit 4. | 0.757 |
GRIN1 | GRIN2A | ENSACAP00000001568 | ENSACAP00000000881 | Glutamate ionotropic receptor NMDA type subunit 1. | Glutamate ionotropic receptor NMDA type subunit 2A. | 0.999 |
page 1 of 6