Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATR | CHTF18 | ENSACAP00000004848 | ENSACAP00000008896 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Chromosome transmission fidelity factor 18. | 0.581 |
ATR | EXO1 | ENSACAP00000004848 | ENSACAP00000003312 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Exonuclease 1. | 0.925 |
ATR | FANCM | ENSACAP00000004848 | ENSACAP00000004068 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | FA complementation group M. | 0.991 |
ATR | MLH1 | ENSACAP00000004848 | ENSACAP00000009935 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | MutL homolog 1. | 0.542 |
ATR | RAD51 | ENSACAP00000004848 | ENSACAP00000013598 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.872 |
ATR | RAD52 | ENSACAP00000004848 | ENSACAP00000000025 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | RAD52 homolog, DNA repair protein. | 0.941 |
ATR | RECQL4 | ENSACAP00000004848 | ENSACAP00000010438 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | RecQ like helicase 4. | 0.936 |
ATR | RPA1 | ENSACAP00000004848 | ENSACAP00000014346 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.983 |
ATR | TOP3A | ENSACAP00000004848 | ENSACAP00000009102 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.774 |
ATR | XRCC3 | ENSACAP00000004848 | ENSACAP00000010557 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. | 0.741 |
CHTF18 | ATR | ENSACAP00000008896 | ENSACAP00000004848 | Chromosome transmission fidelity factor 18. | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | 0.581 |
CHTF18 | EXO1 | ENSACAP00000008896 | ENSACAP00000003312 | Chromosome transmission fidelity factor 18. | Exonuclease 1. | 0.612 |
CHTF18 | RAD51 | ENSACAP00000008896 | ENSACAP00000013598 | Chromosome transmission fidelity factor 18. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.422 |
CHTF18 | RAD52 | ENSACAP00000008896 | ENSACAP00000000025 | Chromosome transmission fidelity factor 18. | RAD52 homolog, DNA repair protein. | 0.680 |
CHTF18 | RECQL4 | ENSACAP00000008896 | ENSACAP00000010438 | Chromosome transmission fidelity factor 18. | RecQ like helicase 4. | 0.959 |
CHTF18 | RPA1 | ENSACAP00000008896 | ENSACAP00000014346 | Chromosome transmission fidelity factor 18. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.436 |
EXO1 | ATR | ENSACAP00000003312 | ENSACAP00000004848 | Exonuclease 1. | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | 0.925 |
EXO1 | CHTF18 | ENSACAP00000003312 | ENSACAP00000008896 | Exonuclease 1. | Chromosome transmission fidelity factor 18. | 0.612 |
EXO1 | FANCM | ENSACAP00000003312 | ENSACAP00000004068 | Exonuclease 1. | FA complementation group M. | 0.903 |
EXO1 | MLH1 | ENSACAP00000003312 | ENSACAP00000009935 | Exonuclease 1. | MutL homolog 1. | 0.989 |
page 1 of 6