STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf72C9orf72-SMCR8 complex subunit. (481 aa)    
Predicted Functional Partners:
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.993
WDR41
WD repeat domain 41.
    
 0.992
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.953
LOC100566712
Uncharacterized protein.
    
 0.928
LMLN
Leishmanolysin-like peptidase.
    
 
 0.827
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
  
 
 0.740
FUS
FUS RNA binding protein.
    
 
 0.697
LOC103279666
Uncharacterized protein.
      
 0.646
HTT
Uncharacterized protein.
      
 0.644
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
  
 0.637
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.