STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxc8Homeobox C8. (242 aa)    
Predicted Functional Partners:
pbx1
Homeobox domain-containing protein.
    
 0.691
HOXB6
Homeobox B6.
   
 
0.578
HOXB7
Homeobox B7.
   
 
0.538
PBX3
PBX homeobox 3.
    
 0.531
LOC100563692
Homeobox domain-containing protein.
    
 0.531
PBX2
PBX homeobox 2.
    
 0.531
PBX4
PBX homeobox 4.
    
 0.531
HOXC9
Homeobox C9.
   
 
0.510
MEIS2
Meis homeobox 2.
   
 0.503
HOXB5
Homeobox B5.
  
  
0.490
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.