STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSH1Slingshot protein phosphatase 1. (830 aa)    
Predicted Functional Partners:
CFL2
Cofilin 2; Belongs to the actin-binding proteins ADF family.
    
 0.946
SSH2
Slingshot protein phosphatase 2.
  
  
 
0.903
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
      
 0.659
LIMK1
LIM domain kinase 1.
   
 0.493
mgat5b
Uncharacterized protein.
   
 0.461
mgat5
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.
   
 0.459
CFL1
Cofilin 1; Belongs to the actin-binding proteins ADF family.
    
 
 0.421
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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