STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN3Tetraspanin. (253 aa)    
Predicted Functional Partners:
IGSF8
Immunoglobulin superfamily member 8.
    
 
 0.599
TSG101
Tumor susceptibility 101.
      
 0.547
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.541
RCN2
Reticulocalbin 2.
   
  
 0.522
SCAPER
S-phase cyclin A associated protein in the ER.
      
 0.516
GHITM
Growth hormone inducible transmembrane protein.
      
 0.503
H9GK18_ANOCA
Tetraspanin.
      
0.468
cd82
Tetraspanin.
      
0.468
DIP2C
Disco interacting protein 2 homolog C.
      
 0.414
G2E3
G2/M-phase specific E3 ubiquitin protein ligase.
      
 0.414
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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