STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL10A1Collagen type X alpha 1 chain. (623 aa)    
Predicted Functional Partners:
COLEC10
Collectin subfamily member 10.
  
 
  0.537
COL4A2
Collagen type IV alpha 2 chain.
  
  
 
0.438
LOC103279638
C-type lectin domain-containing protein.
  
 
  0.434
SP7
Sp7 transcription factor.
    
 0.432
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
 
 0.432
CLEC19A
C-type lectin domain containing 19A.
    
 0.430
CLEC11A
C-type lectin domain containing 11A.
    
 0.427
FNDC7
Fibronectin type III domain containing 7.
      
 0.424
GHR
Growth hormone receptor.
      
 0.424
COL4A1
Collagen type IV alpha 1 chain.
  
  
 
0.418
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.