STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100560693Uncharacterized protein. (362 aa)    
Predicted Functional Partners:
LOC100552814
Ion_trans domain-containing protein.
 
     0.916
H9GMB4_ANOCA
Ion_trans domain-containing protein.
 
      0.900
SULF2
Extracellular sulfatase.
      
 0.688
ELAVL4
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.545
nhlh2
BHLH domain-containing protein.
      
 0.544
RORB
RAR related orphan receptor B.
      
 0.540
SLC17A6
Solute carrier family 17 member 6.
      
 0.539
Catsper1
Ion_trans domain-containing protein.
    
 0.533
LOC100555851
Ion_trans domain-containing protein.
   
 0.522
CATSPER3
Cation channel sperm associated 3.
   
 0.506
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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