STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPP1Secreted phosphoprotein 1. (289 aa)    
Predicted Functional Partners:
G1KCR2_ANOCA
Link domain-containing protein.
   
 0.911
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
   
 0.773
IBSP
Integrin binding sialoprotein.
  
  
 0.764
itga9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
   
 0.737
FN1
Fibronectin 1.
     
 0.737
itgb3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.705
PKD2
Polycystin 2, transient receptor potential cation channel.
      
 0.688
SPARC
Secreted protein acidic and cysteine rich.
      
 0.680
LOC100553835
ZnMc domain-containing protein.
     
 0.662
LOC100553635
ZnMc domain-containing protein.
     
 0.662
Your Current Organism:
Anolis carolinensis
NCBI taxonomy Id: 28377
Other names: A. carolinensis, Carolina anole, UCMZ 53793, green anole
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